Publications 2009 – University of Copenhagen

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GeoGenetics > Publications > Publications 2009

Publications 2009

Allentoft ME, Scuster SC, Holdaway RN, Hale M, McLay E, Oskam C, Gibert MTP, Spencer P, Willerslev E, Bunce M. Identification of microsatellites from an extinct moa species using high throughput sequence data. BioTechniques 3,195-200, (2009)

Bartoli L, Fariselli P, Krogh A, Casadio R. CCHMM_PROF: a HMM-basedcoiled-coil predictor with evolutionary information. Bioinformatics, 2009 Nov 1;25(21):2757-63

Benediktsson ÍÖ, Ingólfsson Ó, Schomacker A, and Kjær KH. Formation of submarginal and proglacial end moraines: implications of iceflow mechanism during the 1963-64 surge of Brúarjökull, Iceland. Boreas 38, 440-457, (2009)

Bunce M, Worthy TH, Phillips MJ, Holdaway RN, Willerslev E, Haile J, Shapiro B, Scofield RP, Drummond A, Kamp PJJ, Cooper A. The evolutionary history of the extinct ratite moa and New Zealand Neogene paleogeography. Proc. Natl. Acad. Sci. USA. 106, 20646-20651 (2009)

Campos PF, Willerslev E and Gilbert MTP. Isolation of DNA from ancient samples. In: Handbook of nucleic acids purification. (Ed. Don Liu), 441-461 (2009)

Enghoff, I.B. Fiskeri fra jernalderbopladsen Nørre Hedegård. Pp. 236-246 in Runge, M. (ed.): Nr. Hedegård. En nordjysk byhøj fra ældre jernalder. Jysk Arkæologisk Selskabs Skrifter. Højbjerg. (2009)

Enghoff, I.B. Dyreknogler fra Ronæs Skov-bopladsen. Pp. 243-271 in: Andersen, S.H. (ed.) Ronæs Skov. Marinarkæologiske undersøgelser af kystboplads fra Ertebølletid. Jysk Arkæologisk Selskab. (2009)

Foote AD, Newton J, Piertney SB, Willerslev E, Gilbert MTP. Ecological, morphological and genetic divergence of sympatric North Atlantic killer whale populations. Mol. Ecol. 18, 5207-5217 (2009)

Funder SV, Michelutti N, Simonetti A, Briner J, Creaser RA, Wolfe AP. Temporal trends of pollution Pb and other metals in east-central Baffin Island inferred from lake sediment geochemistry. Science of the Total Environment. 2009 ; vol. 407, 7-7-2009. s. 5653-5662

Gigli E, Rasmussen M, Civit S, Rosas A, de la Rasilla M, Fortea J, Gilbert MTP, Willerslev E, Lalueza-Fox C. An improved PCR method for endogenous DNA retrieval in contaminated Neandertal samples based on the use of blocking primers. J. Archaeol. Sci. 36, 2676-2679 (2009)

Gilbert MTP, Jenkins DL, Higham TFG, Rasmussen M, Malmström H, Svensson EM, Sanchez JJ, Cummings LS, Yohe II RM, Hofreiter M, Götherström A, Willerslev E. Response to Comment on "Pre-Clovis Human Coprolites in Oregon, North America” by Poinar H. et al. Science 325, 148 (2009)

Haile J, Froese DG, MacPhee RDE, Roberts RG, Arnold LJ, Reyes AV, Rasmussen M, Nielsen R, Brook BW, Robinson S, Demuro M, Gilbert MTP, Munch K, Austin JJ, Cooper A, Barnes I, Möller P, Willerslev E. Ancient DNA reveals late survival of mammoth and horse in interior Alaska. Proc. Natl. Acad. Sci. USA. 106, 22352-22357 (2009)

Hebsgaard MB, Arneborg J, Gilbert MTP, Heyn P, Allentoft ME, Bunce M, Munch K, Schweger C, Willerslev E. “The Farm Beneath the Sand” – An Archaeological Case Study on Ancient “Dirt” DNA. Antiquity 83, 430-444 (2009)

Houmark-Nielsen M. MIS 3 interstadial climate and rapid ice advances in the Baltic Basin. Swedish Nuclear Fuel and Waste Management. SKB-P- 09-10, (2009), Stockholm

Houmark-Nielsen M. Extent, age and dynamics of Marine Isotope Stage 3 glaciations in the southwestern Baltic Basin. Boreas vol.39, 10.1111/j.1502-3885.2009.00136.x.ISSN 0300-9483 (2009)Til toppen

Steeman, M.E. A new baleen whale from the Late Miocene of Denmark and early mysticete hearing. Palaeontology, 52, 1169–1190 (2009)

Katzourakis A, Gifford RJ, Tristem M, Gilbert MTP, Pybus OG. The macroevolution of complex retroviruses. Science 325:1512 (2009)

King GA, Gilbert MTP, Willerslev E, Collins MJ, Kenward HK. Recovery of DNA from archaeological insect remains: first results, problems and potential. J. Arch. Sci. 36, 1179 1183 (2009)

Krüger J, Kjær KH, Schomacker A. Dead-ice Environments: a Landsystems Model for a Debris-charged Stagnant Lowland Glacier Margin, Kötlujökull. In: The Mýrdalsjökull ice cap, Iceland: glacial processes, sediments and landforms on an active volcano. (Ed. by Schomacker A et al.). Developments in Quaternary Science 13 (2009). Elsevier, Amsterdam. Pp. 105-126

Krüger J, Schomacker A, Kjær KH. The Mýrdalsjökull Ice Cap, Iceland: Glacial Processes, Sediments and Landforms on an Active Volcano: An Introduction. In: The Mýrdalsjökull ice cap, Iceland: glacial processes, sediments and landforms on an active volcano. (Ed. by A. Schomacker et al.). Developments in Quaternary Science 13 (2009). Elsevier, Amsterdam. Pp. 1-3

Malmström H, Gilbert MTP, Thomas MG, Brandström M, Storå J, Molnar P, Andersen PK, Bendixen C, Holmlund G, Götherström A, Willerslev E. Ancient DNA Reveals lack of Continuity between Neolithic Hunter-gatherers and Contemporary Scandinavians. Curr. Biol. 19, 1758 – 1762 (2009)

Mourier T, Willerslev E. Retrotransposons and non-protein coding RNAs. Brief Funct. Genomic Proteomic 8, 493-501 (2009)

Rasmussen M, Cummings LS, Gilbert MTP, Bryant V, Smith C, Jenkins DL, Willerslev E. Response to Comment on "Pre-Clovis Human Coprolites in Oregon, North America” by Goldberg P. et al. Science 325, 148 (2009)

Schomacker, A., Kjær, K.H. & Krüger, J. Subglacial Environments, Sediments and Landforms at the Margins of Mýrdalsjökull. In: The Mýrdalsjökull ice cap, Iceland: glacial processes, sediments and landforms on an active volcano. (Ed. by Schomacker A et al.). Developments in Quaternary Science 13 (2009). Elsevier, Amsterdam. Pp. 127-144

Schroeder H, O'Connell TC, Evans J, Shuler K and Hedges REM. Trans-Atlantic slavery: Isotopic evidence for forced migration to Barbados. American Journal of Physical Anthropology 139: 547-557, (2009)Til toppen

Solazzo C, Fitzhugh W, Loring S, Cappellini E, Gilbert MTP, Willerslev E, Penkman K, Collins MJ. What’s in the pot? Multiple approaches to the analysis and interpretation of organi residues in ceramics from the Iñupiat culture, Point Barrow, Alaska. Antiquity 83, 430–444 (2009)

Steeman ME, Hebsgaard MB, Fordyce RE, Ho SYW, Rabosky DL, Nielsen R, Rahbek C, Glenner H, Sørensen MV, Willerslev E. Radiation of Extant Cetaceans Driven by Restructuring of the Oceans. Syst. Biol. 58, 573-585 (2009)

Thomsen PF, Elias S, Gilbert MTP, Munch K, Kuzmina S, Sher A, Haile J, Holdaway R, Willerslev E. Non-destructive sampling of ancient insect DNA. PLoS ONE 4, e5048 (2009)

Valen E, Sandelin A, Winther O, Krogh A. Discovery of regulatory elements is improved by a discriminatory approach. PLoS Comput Biol. 2009 Nov;5(11):e1000562. Epub 2009 Nov 13

van der Meer JJM, Kjær KH, Krüger J, Rabassa J, Kilfeather AA. Under pressure: Clastic dykes in glacial settings. Quaternary Science Reviews 28, 708-720. (2009)

van der Meer JJM, Carr SJ, Kjær KH. Mýrdalsjökull’s Forefields Under the Microscope. The Micromorphology of Meltout and Subglacial Tills. In: The Mýrdalsjökull ice cap, Iceland: glacial processes, sediments and landforms on an active volcano. (Ed. by Schomacker A et al.). Developments in Quaternary Science 13, (2009). Elsevier, Amsterdam. Pp. 159-180

Weinstock J, Prieto A, Shapiro B, Gilbert MTP, Marin JC, Gonzalez B, Willerslev E. The Late Pleistocene distribution of vicuñas (Vicugna vicugna) and the “extinction” of the gracile llama (“Lama gracilis”): new molecular data. Quat. Sci. Rev. 28, 1369-1373 (2009)

Willerslev E, Gilbert MTP, Binladen B, Ho SYW, Campos PF, Ratan A, Tomsho LP, da Fonseca RR, Sher A, Kuznetsova TV, Nowak-Kemp M, Roth TL, Miller W, Schuster SC. Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution. BMC Evol. Biol. 9, 95 (2009)

Aaris-Sørensen K. Diversity and dynamics of the mammalian fauna in Denmark throughout the last glacial-interglacial cycle, 115-0 kyr BP. Fossils and Strata 57: 1-59, (2009)